CDS

Accession Number TCMCG023C16791
gbkey CDS
Protein Id PIN10446.1
Location join(55037..55268,55752..56674,56832..56921,56993..57457,58485..58578,58664..58716,58795..58863)
Organism Handroanthus impetiginosus
locus_tag CDL12_16968

Protein

Length 641aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA324125, BioSample:SAMN05195323
db_source NKXS01003222.1
Definition Heterogeneous nuclear ribonucleoprotein R (RRM superfamily) [Handroanthus impetiginosus]
Locus_tag CDL12_16968

EGGNOG-MAPPER Annotation

COG_category A
Description RNA recognition motif
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE -
KEGG_ko -
EC -
KEGG_Pathway -
GOs GO:0002376        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003676        [VIEW IN EMBL-EBI]
GO:0003723        [VIEW IN EMBL-EBI]
GO:0003727        [VIEW IN EMBL-EBI]
GO:0003729        [VIEW IN EMBL-EBI]
GO:0003730        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005681        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0006417        [VIEW IN EMBL-EBI]
GO:0006950        [VIEW IN EMBL-EBI]
GO:0006952        [VIEW IN EMBL-EBI]
GO:0006955        [VIEW IN EMBL-EBI]
GO:0007623        [VIEW IN EMBL-EBI]
GO:0008143        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0009889        [VIEW IN EMBL-EBI]
GO:0009890        [VIEW IN EMBL-EBI]
GO:0009891        [VIEW IN EMBL-EBI]
GO:0009892        [VIEW IN EMBL-EBI]
GO:0009893        [VIEW IN EMBL-EBI]
GO:0009894        [VIEW IN EMBL-EBI]
GO:0009895        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010033        [VIEW IN EMBL-EBI]
GO:0010468        [VIEW IN EMBL-EBI]
GO:0010556        [VIEW IN EMBL-EBI]
GO:0010557        [VIEW IN EMBL-EBI]
GO:0010558        [VIEW IN EMBL-EBI]
GO:0010604        [VIEW IN EMBL-EBI]
GO:0010605        [VIEW IN EMBL-EBI]
GO:0010608        [VIEW IN EMBL-EBI]
GO:0010628        [VIEW IN EMBL-EBI]
GO:0010629        [VIEW IN EMBL-EBI]
GO:0016020        [VIEW IN EMBL-EBI]
GO:0017148        [VIEW IN EMBL-EBI]
GO:0019219        [VIEW IN EMBL-EBI]
GO:0019222        [VIEW IN EMBL-EBI]
GO:0030425        [VIEW IN EMBL-EBI]
GO:0031323        [VIEW IN EMBL-EBI]
GO:0031324        [VIEW IN EMBL-EBI]
GO:0031325        [VIEW IN EMBL-EBI]
GO:0031326        [VIEW IN EMBL-EBI]
GO:0031327        [VIEW IN EMBL-EBI]
GO:0031328        [VIEW IN EMBL-EBI]
GO:0031329        [VIEW IN EMBL-EBI]
GO:0031330        [VIEW IN EMBL-EBI]
GO:0032268        [VIEW IN EMBL-EBI]
GO:0032269        [VIEW IN EMBL-EBI]
GO:0032270        [VIEW IN EMBL-EBI]
GO:0032991        [VIEW IN EMBL-EBI]
GO:0034097        [VIEW IN EMBL-EBI]
GO:0034248        [VIEW IN EMBL-EBI]
GO:0034249        [VIEW IN EMBL-EBI]
GO:0034250        [VIEW IN EMBL-EBI]
GO:0034341        [VIEW IN EMBL-EBI]
GO:0036477        [VIEW IN EMBL-EBI]
GO:0042221        [VIEW IN EMBL-EBI]
GO:0042995        [VIEW IN EMBL-EBI]
GO:0043005        [VIEW IN EMBL-EBI]
GO:0043025        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043487        [VIEW IN EMBL-EBI]
GO:0043488        [VIEW IN EMBL-EBI]
GO:0043489        [VIEW IN EMBL-EBI]
GO:0044297        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044463        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0045087        [VIEW IN EMBL-EBI]
GO:0045727        [VIEW IN EMBL-EBI]
GO:0045934        [VIEW IN EMBL-EBI]
GO:0048027        [VIEW IN EMBL-EBI]
GO:0048255        [VIEW IN EMBL-EBI]
GO:0048511        [VIEW IN EMBL-EBI]
GO:0048518        [VIEW IN EMBL-EBI]
GO:0048519        [VIEW IN EMBL-EBI]
GO:0048522        [VIEW IN EMBL-EBI]
GO:0048523        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0050794        [VIEW IN EMBL-EBI]
GO:0050896        [VIEW IN EMBL-EBI]
GO:0051171        [VIEW IN EMBL-EBI]
GO:0051172        [VIEW IN EMBL-EBI]
GO:0051173        [VIEW IN EMBL-EBI]
GO:0051246        [VIEW IN EMBL-EBI]
GO:0051247        [VIEW IN EMBL-EBI]
GO:0051248        [VIEW IN EMBL-EBI]
GO:0051252        [VIEW IN EMBL-EBI]
GO:0051253        [VIEW IN EMBL-EBI]
GO:0051716        [VIEW IN EMBL-EBI]
GO:0060255        [VIEW IN EMBL-EBI]
GO:0061013        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0065008        [VIEW IN EMBL-EBI]
GO:0070717        [VIEW IN EMBL-EBI]
GO:0070887        [VIEW IN EMBL-EBI]
GO:0070934        [VIEW IN EMBL-EBI]
GO:0070937        [VIEW IN EMBL-EBI]
GO:0071013        [VIEW IN EMBL-EBI]
GO:0071204        [VIEW IN EMBL-EBI]
GO:0071310        [VIEW IN EMBL-EBI]
GO:0071345        [VIEW IN EMBL-EBI]
GO:0071346        [VIEW IN EMBL-EBI]
GO:0080090        [VIEW IN EMBL-EBI]
GO:0090365        [VIEW IN EMBL-EBI]
GO:0090367        [VIEW IN EMBL-EBI]
GO:0097159        [VIEW IN EMBL-EBI]
GO:0097447        [VIEW IN EMBL-EBI]
GO:0097452        [VIEW IN EMBL-EBI]
GO:0097458        [VIEW IN EMBL-EBI]
GO:0120025        [VIEW IN EMBL-EBI]
GO:0120038        [VIEW IN EMBL-EBI]
GO:1901363        [VIEW IN EMBL-EBI]
GO:1902369        [VIEW IN EMBL-EBI]
GO:1902373        [VIEW IN EMBL-EBI]
GO:1902494        [VIEW IN EMBL-EBI]
GO:1903311        [VIEW IN EMBL-EBI]
GO:1903312        [VIEW IN EMBL-EBI]
GO:1990635        [VIEW IN EMBL-EBI]
GO:1990904        [VIEW IN EMBL-EBI]
GO:2000112        [VIEW IN EMBL-EBI]
GO:2000113        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGAGAACTCGGAGCGCTAGCGCCAGCAAATCACCCGCGACGGTTAAGAAGACACCGGCGGCGGCCAGGAAAGCCGCCGCCAAGGCACAGGCGACGCCGTCCTCTGCCGATGAAAAGGTGGAATCTTCTCCGACGGAGACGACGACCCCGAAAATAGTCGAGCCAAAGCGTGCGTCTGGCGGAAAGGGAAAGCAAGTCCGGGTCGCCTCCGATTCCGAGCCTCAAGAATTAGTTGAACAATGTGGTCAGGGGTCAGCGGCAGCAAAACCTGCTTCTCGAACTAAAATAGTAAGAAGGGTTGTAAAGAAAGTGATCAGGAAAACTCCAGTTTCAACAATTGAATCAGGGGTAGTTGAGAAGGCGAAGACTGAAGCAACAACGAGAGAGGAAACAGCAAAGGATTTGAAGAATACAGAAGCTGATAATGATGAACCTGCTGCCGATGAAAATCGTTTGGTTCAAAATGTTGAGCCCTCTGTTTTGGAGAATGAAAACGTTGGTAATTCTGGGAACTCTTCTAAGAAGGAAGAAGAGGAGGCGGGTGAACCAGAAAAGCACTTAATGGAAAATATTGAAGAGTTATCTGTGACTATGGAACCTGCCACAATATATACAAAGTCTGTGGAGAGTGAAGAACCCTATATAACTAATGAAAAAGAAGAGTTAAAGGAAGAAAGGGAGGAGCAAATAGAAATAACTGATAAAAGAGATCCTAAAGGTAAAACAATAGGAACGGAGGAGGATACCAGTAATGAGGTGAAACAGCTGAATGCCTCCCTAGAGCAGCCTGATGATGAAAAAATTGAGGGGCTCAGTGATCAAGAAGTTCATGAAGAGTTTGGGGGAGAAGATTTTGTCGATTATGATTCACAAGAGAATGAGGCAGAAGCTGAGACATTCGAAGAGGAACACATGCAGTTGAATGCTGCTGCCAGGGACCGCAAGGTAACGAGAGAGAGGGAGGTGTTTGTTGGTGGTTTAGACCGGGATGCTTCGGAAGGGGATATTAGAAAGGTATTTGAGTACGCAGGTGAGGTTGTTGCAGTTCGCATGCATGTAGATCCATCAACAAAGAAGAACATGGGGTACGCTTTTGTCCAGTTTGCAACAAAGGAGCAAGCAAGCCGTGCTTTGTCAGAAATGAAGAATCCTGTTATACATGGAAAACGATGTGGGACCGCACCAAGTCAGGATAATGACACATTGTTCTTGGGAAATATTTGCAACACATGGACAAAGGAAGCGATAAGACAAAAACTGAAGGATTACAGCGTGGATGGTGTTGAGAACATCACTTTGGTAGCAGACCCTCGATGTGAAGGGCTGAGTCGTGGTTTCGCATTCGTTGAGTTCTCTTCTCATGCTGAAGCTATGTTGGCTTATAAAAGACTCCAAAAGCCTGATGCTGTATTTGGCCACTCTGAAAGAACTGCTAAAGTTGCTTTCGCTGAACCTTTACGAGAGCCAGATCCAGAGGTCATGGCCAAGGTTAAATCAGTGTTTATTGATGGGCTTCCACCACATTGGGACGAAGATGGTGTGAGAGAGAAATTCGAAGTTTTCGGCGAGATAGCCCGAATTGTGTTGGCACGGAATATGTCAACAGCCAAGAGGAAGGATTTTGGATTTGTTCATTTCAAGACACATGAAGCTGCAGTTTCATGTGTTGAAGGTGTAAACAACAATGGGTTGAATGATGGTAACTCAAAGGATCAGGATCCTGAGTTTGCAGAGCCTAGCAGACATCACCCACGACTGGATCAGTTAGACACTGCTGCTCCATTTCATGGAGCTAGATATCGAGATGATCTTGGAGCTGATAGTGGCTTTTATCGCCAAAATTATTATGGTTCTGAATATGGTGCTCGTTCATATTCATCGTTTTATGGGGATGATCACACATATGGACGTGGATATTACCATTAG
Protein:  
MRTRSASASKSPATVKKTPAAARKAAAKAQATPSSADEKVESSPTETTTPKIVEPKRASGGKGKQVRVASDSEPQELVEQCGQGSAAAKPASRTKIVRRVVKKVIRKTPVSTIESGVVEKAKTEATTREETAKDLKNTEADNDEPAADENRLVQNVEPSVLENENVGNSGNSSKKEEEEAGEPEKHLMENIEELSVTMEPATIYTKSVESEEPYITNEKEELKEEREEQIEITDKRDPKGKTIGTEEDTSNEVKQLNASLEQPDDEKIEGLSDQEVHEEFGGEDFVDYDSQENEAEAETFEEEHMQLNAAARDRKVTREREVFVGGLDRDASEGDIRKVFEYAGEVVAVRMHVDPSTKKNMGYAFVQFATKEQASRALSEMKNPVIHGKRCGTAPSQDNDTLFLGNICNTWTKEAIRQKLKDYSVDGVENITLVADPRCEGLSRGFAFVEFSSHAEAMLAYKRLQKPDAVFGHSERTAKVAFAEPLREPDPEVMAKVKSVFIDGLPPHWDEDGVREKFEVFGEIARIVLARNMSTAKRKDFGFVHFKTHEAAVSCVEGVNNNGLNDGNSKDQDPEFAEPSRHHPRLDQLDTAAPFHGARYRDDLGADSGFYRQNYYGSEYGARSYSSFYGDDHTYGRGYYH